Deliverables

Deliverable reports from the transPLANT project.

Title Description Report
Deliverable 2.1 Report: "Translational research for agronomical application" D2.1 (pdf)
Deliverable 3.1 Recommended ontology set for use in phenotype description and epigenetic variability D3.1 (pdf)
Deliverable 3.2 Format specifications for data exchange by flat file and web services D3.2 (pdf)
Deliverable 5.1 Updated data warehouses developed for genomic annotation and variation data D5.1 (pdf)
Deliverable 5.2 Implementation of transPLANT cloud computing environment D5.2 (pdf)
Deliverable 7.1 A registry of plant genomic information D7.1 (pdf)
Deliverable 7.2 Interfaces for integrating omics data within the transPLANT user interface D7.2 (pdf)
Deliverable 8.1 Datasets with associations available and integrated into visualisation interfaces D8.1 (pdf)
Deliverable 8.2 Implementation of a pan-genome viewer D8.2 (pdf)
Deliverable 9.1 Variation repository, first release D9.1 (pdf)
Deliverable 9.2 Data from Arabidopsis 1001 genomes project integrated in central hub D9.2 (pdf)
Deliverable 10.1 Statistical descriptors for genotype-phenotype map construction D10.1 (pdf)
Deliverable 10.2 Software for analysis of genome-wide association data D10.2 (pdf)
Deliverable 11.1 Search engine software core released and trained D11.1 (pdf)
Deliverable 12.1 Development and test of sophisticated statistical methods to model variation in large plant genomes D12.1 (pdf)
Deliverable 12.2 A web-based interface for a decision support system that evaluates and recommends on genome sequencing D12.2 (pdf)